Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015839545.1_cds_XP_016507321.1_20459
CDS Infomation

[gene=LOC107825010] [db_xref=GeneID:107825010] [protein=tRNA threonylcarbamoyladenosine dehydratase-like] [protein_id=XP_016507321.1] [location=join(33773..33885,34608..34651,35590..35668,36453..36600,37626..37838,38642..38776,39420..39554,39742..39957,41277..41401,43142..43199,43458..43568)] [gbkey=CDS]
Sequence

ATGGAAGAGAAAGTGAAGATTTTAGCAATTATAGGAGCTGGAGCTGTACTGGGTTCTGCT
GCTACACTCGCTATTTCCAAGCTTCTTTCCAATCCAATGCCAATAAACAACCAAAGTGTC
GGAAAAGAGTATATAAGTGAGGCAGTAAATTCAAATGAGCTTCCTCAATCCAAATATAAT
GGAATGGCTACTCCAAACCTGTTGACTGATGAAGTAGTTTCCGAACAACTAACCAGGAAT
ATACAGTTCTTTGGTCTTGAAGCTCAACAGAAAGTCACTGCATCATATGTTGTGGTAATC
GGTCTAGGAGGAGTTGGAAGTCATGCTGCATCCATGCTTCTGAGGTCAGGGGTTGGACGG
CTACTCCTTGTGGACTTCGACCAGGTGACAGTCTCCTCATTAAATAGACATGCTGTTGCC
ACAAGGGAAGATGTTGGTACCCCAAAAGCCCTATGCCTTAAGAAGCACTTCCAATCAATT
TTCCCGGAGTGCCATATAAATGCAAAAGTTATCTTATATGATTCATTGTCCGAAGAAGAA
ATTCTGTCTGGCCACCCTGACTTTGTCCTTGATTGTATTGATAATATCGACACAAAGGTG
GCACTTCTTGCTGCATGTGTTCGAAGAGGTTTGAAAGTTTTATCTGCAACAGGAGCTGGC
GCAAGGGCTGATCCAACAAGAATTCGTGTGGCTGACTTAAGAGAGTCCACCAATGACCCT
CTATCTCGAGCTGTAAGACATCGTTTGAGAAAAGATCATGGTATTGATGGTGGTATTCCT
GTGGTATTTTCTTTAGAGAAACCCAAGGCGAAACTGCTTCCCTTTAAAGGGCCAAGTGGA
GAAGAAGAAAATCCTTCAGATTATCAAATAGTGCCTGGATTTAGGGTCCGCATCATTCCA
GTTCTGGGGACTATACCTGCAATTTTTGGGCAAGTCATGGCTTCCTATGTTGCGACTCAA
CTAGCTGGATTGCAAGTCCAGATGGAGCCAGTGGTGAACTTTGATACGGATCACTACCGA
ATCCTCCATCAACGTCTAATTGAGCATGAAGAGTTGCTATATGGCACATCCATGCAAGTG
GAGGTAGATGTTGAAGAAGTTATGTACATTGCCAAAGAGTTGTGGCATGGGAGAAGTGCA
AGGGACCTATCTATTAAAGATGTTGGGCGTGCAATGTGGCGTTCTGTGAATGAGTTAATG
CTTGTGAGGTGGGACCAAACAAAGCCAGCTTCTGTGTCGAATCTAATCCTTCTAAGATTC
AAAGAGGCTGATGAACACGAGTTGAAGTCACTGGAAAATATAAAGGAAGAAGAACCAGAA
TTTTTTGCTAGGGTAACATCTGTGCTTAAGCGAGCAGAATTGGAGTTTGGGTTCTAA

Peptide Sequence

PEP ID

XP_016507321.1
PEP Infomation

PREDICTED: tRNA threonylcarbamoyladenosine dehydratase-like [Nicotiana tabacum]
Sequence

MEEKVKILAIIGAGAVLGSAATLAISKLLSNPMPINNQSVGKEYISEAVNSNELPQSKYN
GMATPNLLTDEVVSEQLTRNIQFFGLEAQQKVTASYVVVIGLGGVGSHAASMLLRSGVGR
LLLVDFDQVTVSSLNRHAVATREDVGTPKALCLKKHFQSIFPECHINAKVILYDSLSEEE
ILSGHPDFVLDCIDNIDTKVALLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDP
LSRAVRHRLRKDHGIDGGIPVVFSLEKPKAKLLPFKGPSGEEENPSDYQIVPGFRVRIIP
VLGTIPAIFGQVMASYVATQLAGLQVQMEPVVNFDTDHYRILHQRLIEHEELLYGTSMQV
EVDVEEVMYIAKELWHGRSARDLSIKDVGRAMWRSVNELMLVRWDQTKPASVSNLILLRF
KEADEHELKSLENIKEEEPEFFARVTSVLKRAELEFGF

Transcript Sequence

Gene sequence data has not been registered.